Yes, without exception, and it is probably the most cost-effective precaution in all koi keeping. The main disease threats affecting the species are transmitted through the introduction of an apparently healthy fish, starting with koi herpesvirus and spring viraemia of carp, two viral diseases that the Southern Regional Aquaculture Center species factsheet identifies as the most serious concerns. Common parasites such as anchor worm, fish lice, and monogenean flukes must also be considered.
In practice, set up a separate, filtered, and aerated tank in which the new arrival spends around four weeks before joining the main pond. Keep it at a temperature that favours the expression of symptoms rather than in cold water, where an infection can remain dormant. Observe swimming behaviour, respiration, fin condition, and appetite every day, and never use the same net or the same bucket for both ponds.
One final point that is often overlooked in aquaponics: the quarantine tank must not be connected to the circuit supplying your crops. Even a mild anti-parasitic treatment can destroy the flora in your biofilter and damage your plants' roots.